Allen first appears in London and as soon as he arrives, a cat eats Timcanpy. Chasing it, he arrives at a "haunted" church and saves a police woman, named Moa from an Akuma. He is soon suspected for her partner's death. However, as the investigation continued, Allen discovered that Moa's brother-in-law (who her sister was forced to kill and then take over) was the Akuma. After a brief fight, Allen kills the Akuma and leaves to the Exorcist HQ.
When Allen arrived at the order, the Gatekeeper mistook him for an Akuma because of the Pentacle mark on his eye and Kanda is dispatched to kill him. This miscommunication is straightened out after his letter of recommendation from General Cross was finally found on Komui Lee's very cluttered desk. Upon his arrival, he met with Hevlaska and was predicted to be the "Destroyer of Time". The meaning of this is never really explained, but Bookman theorizes that "time" referred specifically to the "millennium" or even more specifically, the Millennium Earl. In essence, it is believed that this prophecy means Allen will be the one to someday destroy the Millennium Earl.
Lenalee Lee takes this opportunity to show Allen around as Allen meets many of the Order's members. He quickly became familiar with the chef, Jerry, due to his huge appetite, and the Finders, because he stood up for them against Kanda.
Komui gives Allen his first assignment: find an Innocence in the town of Mater. He is partnered with Kanda and a Finder named Toma. As they arrive, they find the Finders stationed there have been killed by three Akuma. Allen and Kanda quickly dispatch two of them; however, the last one evolves into a Level 2 Akuma. Allen confronts the Akuma, while Kanda heads out to find the Innocence, which was allegedly serving as the heart of a living doll called the Ghost of Mater.
Allen gets beat up by the Akuma's ability to copy anything. The Akuma soon throws him into a building which knocks him out. Later, Allen arrives just in time to stop Kanda from killing Toma (who was forced to wear Allen's "skin" by the Akuma through his copy ability), who Kanda thought was the Akuma in Allen's "skin", when in reality the Akuma was wearing Toma's "skin". Kanda is critically injured, and Allen escapes with him and Toma to find a place to rest. He accidentally finds the Ghost of Mater, named Guzol, with a young girl called Lala, overhearing their conversation and realizing Lala is the actual doll, while Guzol is merely a badly disfigured human. As he hears her plea to stay alive long enough to be with her dying friend Guzol, Allen agrees to wait for her friend to die before taking her heart. Kanda disagrees with such a "foolish" act. The two argue until the Level 2 Akuma arrives, taking Lala's Innocence heart and gravely wounding Guzol. Allen becomes so enraged that he activates his Anti-Akuma arm into an alternate form, which is a type of cannon. He also later morphs it into a type of rod that functions as a sword. Just when Allen seems on the verge of winning, his Innocence rebounds, as his body can't keep up with the morphed weapon. Kanda saves him, and with his help, the two kill the Level 2 Akuma. Allen then returns the heart to Lala and allows her to fulfill her promise to her friend before he dies. With this, Allen takes the Innocence back to HQ.
First Meeting with the Millennium Earl (anime only arc) Edit
As Allen and Toma head back to HQ, Allen runs into the son of one of the Order scientists, John, who wants to kill Akuma. Allen and Toma try desperately to convince John to stop hunting Akuma to no avail. Allen then tries to get John's father Jake Russell to convince him, but he found that Jake was more interested in work than his family. Allen then gets a bad feeling and he goes back to John just as Lenalee is about to throw a Welcome Party for Allen. Allen finds that the Earl had turned John's friend Leo into an Akuma and as the two exchange ideals, the Earl remembers Allen was someone he had made an Akuma for as he summons several Akuma to take him out.
Not to be outdone, Allen and Lenalee attack the Earl and the several Akuma he summoned in a huge battle. Allen defeats them all but the Earl escapes and curses how he didn't kill Allen when he was younger. Afterwards, he goes back to HQ and gets attacked by Komui's newest robot, only to in the end be saved by Lenalee. Later, Lenalee takes Allen to his Welcome Party.
Allen and Lenalee are dispatched to a town in Germany that has been stuck on "October 28" for thirty days. Allen manages to save Miranda Lotto from an Akuma and soon the three meet three more Level 2 Akuma who leave under mysterious orders. Soon, Allen and Lenalee figure out that Miranda's clock holds an Innocence and that Miranda is the clock's accommodator.
After they've tried to help Miranda, Road Kamelot captures them and explains to Allen about the The Noah Family and their connection to the Millennium Earl. His injuries are temporarily healed by Miranda, who activates her Innocence. Allen and Lenalee then work together to defeat Road and her Akuma, but Road forces an Akuma to self-destruct, causing the trapped soul to be destroyed. Horrified, Allen tries to save the soul by killing the Akuma before it detonates but Lenalee stopped him from the possible death, forcing Allen to witness the soul's destruction. Enraged, he shouts as he asks why she stopped him, which leads her to slap him and exclaim that she is his friend so she couldn't watch him die. Road gets bored and is about to leave when Allen tries to kill her in angry anguish. In the end, he cannot do it. Allen and Lenalee then convince a distraught Miranda to stop her activation and let them regain their wounds.
While healing, Allen meets Lavi and the two become fast friends as he learns from Lavi how to live as an Exorcist without his pentacle, and is also reminded of the significance of the Exorcist's coat as once told to him by his master.
Allen,Kanda, and Lavi were assigned by the order to retrieve an innocence fragement. On their way to search for it, they found two people unconcious but the next day they leave and search again.
Together with Lenalee, Allen is sent to look for Kanda who is sent on a mission to retrieve and Innocence, but hasn't contacted headquarters for three days.
Allen joins Lenalee, Lavi, and Bookman to find General Cross, much to his dismay. Allen was soon separated from the group as he publicly apologized to Lenalee about the exploding Akuma incident. Villagers, believing him to be a priest, kidnapped him to help them with a "vampire" problem. Lavi soon appeared with the others and went to help him as Lenalee warned Allen not to get bit by the vampire. He becomes shocked as he finds the vampire Baron Arystar Krory III. As Allen gets bitten by him, Lavi keeps a stake and some garlic with him while chanting that Lenalee will never speak to him again.
As they enter the castle and run into Krory's man-eating flowers, Lavi spots Eliade and he instantly becomes smitten with her. Allen stopped him from trying to become her "lover" and the two fought Krory again. Before the fight however, Allen and Lavi discovered Krory has been killing Akuma instead of people. Allen battled Eliade as Lavi tried to convince Krory to join their side. As he fought her, Allen was knocked out and as he was about to be killed, Allen's pentacle evolved and saved him. Allen then figured out that Eliade was an Akuma. Krory was uninterested in joining them and after seeing Allen try to hurt Eliade, he threw both him and Lavi into the man-eating flowers. Remembering that he'd dealt with this type of flower before and that they only eat people with negative attitudes, Allen told this to Lavi and they both proclaimed feelings of love to the flowers so they could escape.Allen's left eye came back
After that they proved to Krory that Eliade was an akuma since Allen's evolved eye could reflect the soul of the akuma (something he never does again) and Krory killed her. Allen converted Krory to the Black Order so he could have friends. He watched alongside Lavi as Krory burned down his castle to find a new life with his first friends. Sometime after traveling with them, Allen learns about Lenalee's recurring nightmare about the end of the world and him. After hearing this, Allen comforted her and promised to protect her and that he wouldn't die. On the train, Allen found that Krory lost everything he had in a poker game (he didn't know how to play) so Allen played to retrieve Krory's stuff. Allen, of course, cheated in poker as he explained that Cross taught him how to which makes Lavi and Krory worry about what Cross had done to him.
Komui Lee sends Allen to other Branch. Allen goes there but he didn't know it was because general Yeegar wanted to meet him. When he arriver there he is greeted by a finder. The finder tells him how a wonderfull person the general is. Allen is surprised at this because he thought that all the generals were cruel (because of Cross Marian). When suddenly a level 2 Akuma attacks a village, Allen rushes in to help. There he meets General Yeegar. The general then invites him to lunch. Allen thought of the general as a father. After he gave general the golem he came to deliver, Allen left. Soon after Allen left, Road and Tyki attack General Yeegar and broke all the innocence he had with him. This was because they were searching for the heart. When Allen heard the news of the general being attacked he rushed to help. When they find the general they hear him singing a song with a message in it telling them that the earl is searching for the heart.
The Earl orders Lulu Bell to eliminate the exorcists Allen, Lavi, Lenalee and Krory who are searching for Cross Marian. She has to stop them from reuniting with Cross. She starts by disguising as Lenalee to lure Krory and kill him but the other exorcists notice Krory missing and go after him. When they meet up with him they find out that there are two Lenalees. The exorcists get separated, Allen and Krory, Lavi and Lenalee. When Allen and Krory get separated, Lulu Bell's attacks mostly focus on them. The exorcists eventually reunite.
As his team moved to China to locate Cross, Allen learns from Cross's recent lover, Anita that he went to Japan. Allen and his team with Anita and the supporters of Black Order abroad Anita's ship to Japan. Allen soon discovered a huge wave of Akuma coming towards them and as he fought them both he and Lenalee discovered the Akuma's target wasn't them. They find that the Akuma are hunting Suman Dark, who has turned into a Fallen One, for his Innocence.
After hearing about Fallen Ones from Lenalee, Allen promised her that he would save Suman. As they tried to contact him, to no avail, Allen ended up getting absorbed into him as he saved a little girl. Inside Suman, his memories going into Allen's head and realized that Suman betrayed the Black Order to see his family. Desperately, Allen tried to reason with Suman as he traveled to a village in hopes of destroying it. Allen activated his Innocence to its maximum, his left arm stopped activating and broke, causing him to have intense pain. After saving Suman and his Innocence, Allen found out Suman's body is alive but his mind is dead. Allen became devastated as Tyki Mikk destroys Suman body with his Teez. After explaining his abilities to Allen, Tyki destroyed Allen's Innocence to see if it was the heart. Seeing that he supposedly didn't, Tyki had Teez eat a piece of Allen's heart, making a hole and apparently killed him. However, before "dying", Allen had Timcanpy take Suman's Innocence to Lenalee.
Surprisingly, Allen survived Tyki's attack because his Parasite Innocence's particles formed the hole in his heart and closed the wound. His Innocence wasn't destroyed but reduced into particles. Allen began training with the Black Order's Asian branch to restore his Innocence. During training, Allen found out that Bak is a stalker for Lenalee as he has numerous pictures of her.
Allen and Fō began to engage in real battle training. Allen unable to reactivate his Innocence,became frustrated and try harder as he desperately wants to return to his friends. Fō disguises herself as Lō Fwa and talks with Allen, reminding him that he fights not for the sake of fighting, but for something precious to him. As he trains, a Level 3 Akuma attacks the Asian branch and as Fō was about to be killed by it, Allen revived his Innocence as "Crown Clown". With it, he defeated the Akuma and learned of the battle in Edo.
Allen then uses the Noah's Ark to reach Edo in time to save Lenalee from the Earl. With his new Anti-Akuma weapon, Allen easily defeats most of the Akuma. However, Kanda thought he was Tyki(who Kanda is fighting with) and tried to attack him.
As Allen caught up with the others, Lenalee and his emotional reunion is disrupted as Lero teleports Lenalee away. Allen, Lavi, Krory, Chaoji, and Kanda, are teleport together with her into the Noah's Ark. While searching inside, Tyki appears and gives him a key to Road's dimensional doors so he can escape the collapsing Ark. When his team used the key to open a door, Allen ran into Skin Boric. Kanda forced Allen to lead the others ahead.
The next door was opened. Allen found Jasdevi, in their split form. Allen, Lavi and Krory fight violently against Jasdevi but The Twins reveal that they were forced to pay a bill that Cross left for them that was worth 2 million yen. Allen decides to berate the twins as they want him to pay the bill by claiming that was nothing compared to what he has paid in the name of Cross before.
Feeling angry, the twins steal the key and force Allen's team to search for it amongst illusionary keys. Allen gives Lavi time to find the key as he and Krory fight off Jasdevi. Allen becomes angry as Jasdevi attacks Lenalee and Chaoji so with Krory's Noah sensing abilities, they were able to stop the twins until Lavi found the key. With this, the twins merge into a single body, after being called kids. And Krory forces Allen to lead the others out of the Ark.
As Allen helps Lenalee up the stairs, suffering from Lavi's jokes, Allen reassures everyone will be fine. With this, Allen's team runs into Road and Tyki at the top of the tower and a fight later ensues between Allen and Tyki.
Allen and Tyki's battle reaches a point where Allen is able to hit the critical point(exceed 100%) of synchronizing with his Innocence resulting in Crowned Clown- Sword of Exorcism, which makes him capable of becoming a General. Allen unsheathes his new Sword of Exorcism and with it, he is able to exorcise the Noah from Tyki. Allen playing the piano
With this, Road uses Lavi to attack Allen but Lavi is able to overcome Road and as they defeat her and she escapes, Allen tries to save Lero and Tyki. However, after Allen's failed attempt of exorcise the Noah inside him, Tyki is fully awaken as a Noah, turns into a demonic knight and easily beats both Allen and Lavi until General Cross arrives to rescue/ridicule them.
Cross orders Allen to control the Ark, and sends him and Timcanpy into the secret room of The 14th Noah, where Allen faces a dark apparition in the mirror who calls Timcanpy "My Timcanpy". Timcanpy projected a mysterious set of music scores, Allen begins to play on the white piano, at the same time thinking of his wish(give back friends), controlling and restoring the Ark. With the Ark, they take the Akuma Egg to the Black Order Headquarter.
As a result of Allen having the powers of the Musician in order to control the Ark, he is able to save his friends. Controlling the Ark, thus stopping the download of Akuma's egg, so it does not function which causes a large amount of damage to the Earl's plans. Later, Allen ponders on how the symbols he and Mana created years ago were the song to move the Ark. Allen tried to confront his master about it, but he never gets a chance to. After Allen and his friend's return to headquarters, he is put under suspicion by Malcolm C. Rouvelier, who wants to put Allen on trial for treason. In order to ensure Allen's loyalties, Levrier has his subordinate, Howard Link to put Allen under 24-hour supervision. This causes many members of the Order to suspect Allen while close friends, including Komui, Lenalee, Lavi, Bak, Reever, and Johnny, believe that Allen wouldn't betray them.
The Noah, Lulu Bell brought her army of Akuma and Skulls to attack the Headquarters' Lab 5, where the Akuma "Egg" is being studied. The army injures the entire science department and intending to turn the smart ones into Skulls. Allen and Bookman arrive through the Ark, struggle with the endless army of Level 3 Akuma. Lulubell has already secured the Akuma "Egg" and opened a gate to the Millennium Earl. Allen was knocked out and kidnapped but was rescued by the Generals, taking back the Egg. The Egg was destroyed when Lulu Bell attempted to take back the Egg again. The victory is short lived as a Level 4 Akuma appears and easily pummels Allen and destroys part of HQ to the point where it drilled straight to the mantle of the earth itself. When Allen saw the Level 4's soul he started to vomit and stated it was too grotesque to look at. Lenalee with her new form of Dark Boots together with Allen overpowered the Akuma. Eventually, the generals joined in and pour their full power in their attacks, and defeated the Level 4. Allen in his new uniform
Allen recently received word that he is to become the 14th Noah after receiving the memories of the Noah from the original 14th who was the brother of his adoptive father, Mana Walker. This also came with the grim news that he would someday lose his very soul for the 14th to be reborn in his body and that he was doomed to kill the "ningen" or "human(s)" he loved when that happened. Allen is probably very worried, but he has recovered a cheerful front and is trying to keep his mind on his duties. He later appears at the Black Order headquarters in North America preparing to battle the Earl and prevent him from killing the personnel.
Allen and friends are helping move the science team's storage when a massive storm hits the Black Order's HQ, causing a blackout. Unbeknownst to them, someone or something has infected Krory with Komuivitan D, a mysterious substance created by Komui to combat overworking the science team. The Komuivitan was deemed dangerous, as it seems to turn the person who drinks it zombie-like, infecting others with Komuivitan D via biting. Soon enough, most of HQ is infected with Komuivitan D, save for Link, Lavi, Kanda, Allen, Johnny, Lenalee, Bookman, Marie, Reever, some others of the science team, and Komui.
Eventually, however, in an effort to try and create a vaccine from the original source of the entire infection, everyone but Johnny, Allen, and Komui is infected by the oncoming hoarde. Johnny and Allen are infected as well, but not without finding out that Krory is the source of the infection, a ghost in the HQ is to blame for giving Krory Komuivitan, and creating a successful vaccine from Krory's blood, thanks to Komlin EX. Unfortunately, Komlin is destroyed when Krory gets infected by Allen and Lavi after being so overjoyed at seeing them that he doesn't realize that they are affected by Komuivitan D. Komui is infected as well, but luckily, the next day, Bak comes to visit and cures HQ of the Komuivitan D infection after finding a vaccine.
While at the Black Order's new HQ, Cross Marian is attacked and killed. His killer is later revealed to be the unnamed Cardinal, who reveals himself to be Apocryphos, which shows a cutscene of his killer holding Judgement to Cross's head before it was fired. This cutscene was apparently Cross's killer's memories that were accidentally shown to Allen while being attacked. Cross's guards evidentally have fallen asleep during their watch, which is how they don't realize that an intruder has entered Cross's room until it's too late.
Witnessing Cross's bloodied body, one of the guards run off to get Inspector Lvellie. The other guards burst into the room, only to find that Cross's body has fallen through the window, leaving his shattered mask behind on the seat. Cross is never found after this, and during the investigation of his room, Timcanpy seems to sense his master's demise and flies to his room. It is then that Allen discovers his master's tragic death, but never knows his killer until later.
He is sent on a mission now with Kanda and Marie to investigate a strange rash of thefts investigation has lead his team to a boy named Timothy whose Innocence can allow him to control other people's bodies. He is engaged in battle with a second Level 4 Akuma and three other Akuma who are attempting to take the boy. As Kanda managed to injure the Level 4, Allen lost his
Allen's Noah Aurasword, when the Akuma grabbed it and threw it away. After running from the attacks, he managed to use his powers to call Crown Clown back to him, making it fly straight through the Akuma and through himself, pinning them to the wall. As the Akuma comments on him skewering himself and Allen explains the effect of the Sword of Exorcism, he is suddenly racked with pain, as the Sword seems to be affecting himself as well. As the Akuma prepares to fire on him, the 14th Noah inside him surfaces. He touches the Akuma's cheek, causing it to stop, saying only "Good Morning". As the Level 4 is about to answer to Allen as Noah, it is skewered by Kanda before the Level 4 could pronounce "noa..". Allen, who seemed under the 14th's control, looks at Kanda with a hostile expression. Kanda then provokes Allen by calling him "Idiot Bean Sprout". Allen's conscious immediately surfaces and the two slice the Level 4 to pieces.
Upon his return to Headquarters, Allen has a dream in which he is impaled on the Sword of Exorcism and a voice is telling him he is not without sin and that it is he who is in need of salvation. Mana appears in the dream and invites Allen to come with him - though he never calls Allen by name. He uses another name that Allen can't quite make out, symbolized by ***, three unknown characters. Allen asks Mana to call him by his name and then wakes up. His hair turns wavy and bares a hostile expression. This startles Lenalee, who has fallen asleep on the bed next to that of Allen's. Allen seemed not himself -highly likely he was under the 14th control- until Lenalee calls his name. Before the two could start a conversation though, they are interrupted by Link who has been unable to perform his duties because of Lenalee's "immodest state". Allen tries to lock him out for a moment, while Lenalee asks him whether or not he is feeling alright. Link threatens to tell Komui that Allen is alone in a sealed room with Lenalee. Allen immediately relents and opens the door. Later, Lenalee is shown thinking that Allen looked like a different person when he woke up.
Allen arrives to save his camarades and attacks Tyki and the Earl
In Jordan, Allen and a few Third Exorcists began fighting an army of Akuma. There, Allen sees what happens to Akuma souls when Third Exorcists absorb them, and his eye bleeds from it. After that, Tyki appears with some other Noah and began to attack, while taking shelter in a cave, Allen learns the fate of any Third Exorcist but Tyki reappears to battle them.
Allen manages to defeat all the Akuma and disappears and reappears to where the Noahs are keeping the Order hostage. Allen comes from an ark gate beneath a black coffin ready to attack the Noahs but the Earl is waiting for him. As they meet, Allen and Tyki both manage to land on the Earl without seeing him. The Earl grabs Allen and tells him that he'll never go back to the Order, as he'll be leaving it by choice soon. As the Earl questions how he called him by saying "Good Morning" the Level 4 Akuma in the Timothy arc, Allen denies trying to contact the Earl. The 14th, however, appears, and makes a death threat, saying that he'll take over the Earl's place. During this, Allen goes through great pain, as if he were about to transform into the Noah (chapt 189).The 14th took over Allen's body
After managing to recover, Allen informs the Noah, the Earl, and the 14th, he is Allen the Exorcist and nothing will change that. Waizurii then hints at Alma's existence to Allen, and after Alma is brought out, he draws Allen and Road into Kanda's memories. He sees the younger Alma, who says "Raise your hand if you understand me." and does so, only to be stomped across. He realizes that Alma doesn't appear to notice him, and sees a hand rising from a circle of water. That hand then turns out to belong to a naked boy that gets pulled out by Alma. As he's finally pulled out Allen realizes that the child is Kanda.
Allen watching Kanda and Alma's memories with Road
After that Allen watches Kanda's memories as he was involved in the "Second Exorcist Project". The Second Exorcists seem to be killed exorcists whose brains were transferred to artificial bodies. The scientists tried to transfer Innocence to those artificial bodies. Allen witnesses those painful memories and is almost consumed by Kanda's emotions, until Road explains to him that he's seeing Kanda's memories. In those memories Allen learns about the relationship of Alma and Kanda who were both part of the painful experiments and cruel researches of the Asian Branch and always fighting (and after that always regenerating and healing their wounds due to their modified bodies). Allen also witnesses Alma as he was eavesdropping on the scientists who intended to kill Kanda, because he seemed to have dreams of his real memories as an exorcist, and then tried to save his only friend and almost got killed by the CROW in the process. In the end Kanda thinks Alma is dead and survived himself.
After watching Kanda strike Alma down and having endured Kanda's memories long enough, Allen blows his top and punches Kanda in the forehead with his Crown Clown for allowing Waizurii to "spy on his memories" for so long and forgetting his quick temper. Road notes that it's cruel of Allen to strike someone in the head with Innocence but he's also too late. Johnny and Bak begin to call to Allen telling him to stop Alma Karma before he wakes up and turns into an Akuma. Allen stares shocked at the demonic cocoon containing Alma but before he can react, the Earl tells Alma to "kill them" and Alma's awakening causes a huge explosion that blows up the entire North American Branch.
Allen survives, noticing Kanda is confronting Alma, but is shocked that Tokusa used his seals to protect him from most of the blast, despite his injuries. Allen begins to feel guilty that he couldn't save anyone at the time, a thought to which Tokusa knees him on the head, saying that being an Exorcist does not mean he can save everyone. Allen is then relieved that everyone is probably safe when Johnny contacts him. As Alma begins to turn into an Akuma, Allen witnesses Tokusa mutating. Allen attempts to help Tokusa, but is blown away into a wall. Then Allen's Crown Clown activates by itself and forces Allen to use Edge End on Tokusa. Allen begs for the Innocence stop threatening to kill himself with it if the Innocence didn't obey him, but Tokusa approaches Allen. Allen then watches Kanda fight Alma, and asks why Kanda is fighting so seriously to use Four Illusion Style. Tokusa then sneaks up behind him and attacks him, while claiming that he is not an enemy of Exorcists to stop himself, but is struggling. Then the Millennium Earl requests Allen to come along with the Noah Family as the Fourteenth if he wants the Earl to "put an end to this little show."[1]
Allen watches as Tokusa and Alma terrorize all of his comrades present. He tries to call to Tokusa, who no longer recognizes him as he's consumed by Alma's hatred. Tokusa then proceeds to break his leg. He's saved by Bak using "Sealed God" and Fō also comes to his aid, sealing him in a bubble with her. When she sees him looking conflicted, she asks him is he really thinking about taking the Earl's offer. He replies he understands Alma's hate from the memories shown to him by Waizurii but doesn't see a way to save him. They're then attacked by Tyki who injures Fo. He then extends his hand to Allen, telling him not to irritate the Earl any further. Fō yells at Allen for being a fool trying to save everyone, telling him it's not that easy and he can't go deciding on his own.
Tyki casually blasts her but Allen saves her with his Sword of Exorcism, asking whether she thinks he can save him. He begins to fight Tyki but Fō tells him she'll take care of Tyki. Allen goes off to deal with Alma but his leg hinders him so Professor Zu heals him with his magical golem "Atuda" using his own life force. Allen then stops Kanda from attacking Alma with his "Fifth Illusion."
Allen blocks Alma from Kanda's "Fifth Illusion" attack telling Alma to get back more. Later Allen starts mocking Kanda because of his appearance, more later asking Kanda why he stabbed Alma. Kanda then uses "Fifth Illusion Ripping Flash Claw" on Allen and Alma, it is later said that his hair has turned light purple, the cause is because he sublimated his soul to much to the "Fifth Illusions Form". From Kanda using "Fifth Illusion Ripping Flash Claw" it is shown that it is affecting Allen badly. Later on Allen and Alma are still fighting while Fō and Tiki also are, Alma is later shown attacking Kanda with a strong attack but Allen blocks the attack with his Innocence, telling Alma "You should have seen, just like the Noah showed me... The reason why Kanda chose to live nine years ago.. You still won't forgive him?!" Allen is shown holding Alma up by his tail, Alma also starts crying saying "As long as Yū's still alive, i.."
It is shown that the Akuma regenerating ability have reached there limited, Allen is holding Alma from falling but when Kanda attacks Allen moves Alma out of the way not giving Alma to Kanda who wants to kill him. Kanda is latter telling Allen that its his fault Alma is a akuma, also telling him "The one who destroyed this branch and made the Third Exorcists into monsters is all your fault, the fault of the man who belongs to the order even though hes a Noah!" Allen's Innocence activates then he attacks Kanda, screaming Kanda's name. While Kanda screams "Its all your fault, you fucking Noah!" They continue fighting till Alma shoots light at Allen hurting him in his shoulder, crying while doing it. But Allen still attacks Kanda asking Kanda "You think Destroying Alma is going to end everything!" But it is shown that Kanda stabs Allen right in his stomach with his Innocence, the Earl is shown being happy when this happens and Kanda finally regains himself (chapt 197). Allen asked Kanda "Look carefully at Alma's face. Why is he making that kind of face?" The area around where Kanda stabbed him starts to change into the color of a Noah's skin, eventually spreading throughout his whole body. Allen then pushes away from Kanda and falls to the ground showing that his whole body looks like a Noah's, Kanda calls him Bean Sprout as he falls down. Reever from the Black order then says "His body looks like a Noah's..."
After Kanda wounded Allen with his Innocence, The 14th started to awaken. Inside Allen's mind he is chained to a structure and confronted with the 14th. The 14th says that the Earl is going mad and that the Earl and Allen are both puppets. Allen mistakes the 14th for Tyki and then the 14th corrects him and introuduces himself as Neah. After Timcanpy destroyed the barrier an image of Mana appeared which stopped the take over. Allen's left eye activated and then he saw a woman's soul in Alma Karma's body. Angered by this, Alma's hatred reawakens and once more attempts to kill Kanda by activating his self-destruct. The detonation blows Allen back and creates a crater. Kanda is seen on the brink of death and crumbling to pieces.
Allen arrives back at Kanda's body just as Alma's body begins regenerating. Alma begins to crawl as he searches for Kanda's body, saying that he "wants to be by his side." Allen picks up Alma's body in an attempt to bring him to rest beside Kanda. As Allen is carrying him, the dark-matter once more takes over Alma's body in an attempt to consume Alma's soul. Kanda tells Allen to send both he and Alma to "the place where we had our first mission together" (Ghost of Mater Arc). Allen agrees and sends them both through an Ark Gate. Allen then declares to the rest of the people witnessing the event that he cannot allow the Noah nor the Church to get in his way any longer.
Meanwhile, the Third Exorcists are still whirling out of the control, and the Exorcists are forced to battle and kill them. Allen attempts to suppress Tokusa without killing him. As the Order members verbally apprehend Allen for letting Kanda and Alma escape, Allen refutes that they could save the Third Exorcists, and questions if the Order truly intends to destory the Third Exorcist Project. The Earl states that the Third Exorcsists that are still rampaging show the long grudge Alma had for the Organization. Rouvelier then barks an order to go find Alma and destroy his body to stop the the rampage, but Allen persists, prompting Rouvelier to declare that Allen is no longer an Exorcist.
Allen continues his attempt to persuade Tokusa, telling him that he isn't Alma, and that only Alma's cells are causing him to rampage. Because it is Tokusa's body, he should be able to control. But Tokusa asks Allen why he bothers to even save him if Allen should just kill him. Allen then asks back why the Third Exorcists are giving up so easily, and coaxes Tokusa into surpressing Alma's rage. However, Link arrives carrying Tewaku, and restrains Allen with seals, mistaking Allen for trying to kill Tokusa. Tewaku transforms and tries to attack Allen, but Timcanpy appears as a huge monster and saves him in time.The Earl whisks away Tokusa and the others for his own uses, declaring that he will return for the 14th Noah. Allen is shown to be imprisoned along with Timcanpy.
Knowing he is held for treason but not yet put to death so he can be questioned, Allen becomes very paranoid and refuses to eat, fearing truth serum has been slipped into his food. He's purposely unresponsive to interrogations, and seems intent on retreating mentally. Because of his actions, priests from the Vatican have taken to drawn-out forms of torture, leaving the worst of his wounds, the stab through his stomach he received from Kanda, largely unattended to.
It is only when Howard Link makes him accept food sent by Jerry (which has a rather vulgar slur aimed at Rouvelier scrawled on top, thus proving no one has tampered with it) that Allen begins eating. Allen then apologizes to Link.
Link is rather annoyed that the first words out of Allen's mouth are an apology, but reveals his shared past with the Third Exorcists. Allen regrets not having become better friends with them, and wishes he had known more about the situation. He also thinks Kanda and Alma could've survived if he had had more knowledge, and realizes all he's doing is hating without knowing anything about the "14th." He then begins to think about the 14th, wondering that if he knew more, something would change.
Link, though surprised that the cardinal is there, allows him to approach Allen, only to be shocked when the fingers of the cardinal's left hand unfurl into dangerous-looking feather-blades. The blades pierce into Allen's innocence and cause him great pain. Link tries to intervene, but the cardinal attacks him and erases Link's memory of the cardinal. Allen attempts to stop the cardinal and pierces his head by accident with his innocence, as his vision was blurred and he couldn't move well. The cardinal is unaffected by the attack and begins moving towards Allen. The cardinal continues what he was doing earlier, and Allen sees a vision of his Master, probably the night when he discovered missing, assumed dead.
Tyki Mikk (probably sent by the Millenium Earl) intervenes and temporarily disables the cardinal by smashing his head into the floor. Road appears in her doll form and reverts back to her noah form upon seeing Allen. She comforts him, since he is incredibly shaken by what he saw of his Master. It is then revealed that the cardinal is in fact an independent innocence known as Apocryphos, which exists solely to guard the Heart, and to do so is intent on absorbing Allen, as it is "what your [Allen's] Innocence wants". After a brief struggle between Apocyphos and Tykki, Allen attacks it claiming that the thought of merging with the person who killed Cross sickens him, and either blacks out and is taken by Tykki and Road, or willingly goes with them. Either way a message is broadcast across the Black Order that he has left with the Noah and his status as an Exorcist has been suspended.
After having a small argument with Tyki which ends in Tyki saying Allen has "two monsters" inside of him (his Noah memories, and his Innocence) and as a result "sows Chaos" wherever he goes, Tyki leaves. Road wakes up from an apparent coma-like state and reveals that the inspirational phrase Mana gave to Allen in the past "Don't Stop. Keep Walking.", was originally said by Neah to Mana. Road adds that Neah fought to protect Mana, then disappears. Absorbing all of this, Allen decides to follow his own path without the Noah and the Order and opens a portal via Ark. Just before he steps through to leave, Lenalee catches up to him and begs him not to go because if he does it means they will have to fight each other. Allen hugs her and assures her that he will always remain an exorcist even though their paths may be different. Before leaving he tells Lenalee that he loves her and the Order, and that the Order will always be his home forever and ever. Allen lets go of Lenalee and steps through the portal. As it's crumbling away, Lenalee falls on her knees crying and screams for Allen.
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